Publications
2026
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An Artifact-based Agent Framework for Adaptive and Reproducible Medical Image Processing
MICCAI, 2026Accepted
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Analytic Bounds on GAMLSS Model Variability of Normative White Matter Brain Charts
SPIE Medical Imaging 2026: Image Processing, 2026OralAccepted
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Beyond FA Grand Challenge Findings on Imaging Biomarkers for Alzheimer’s Disease
Journal of Medical Imaging, 2026Accepted
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Beyond the LUMIR Challenge: The Pathway to Foundational Registration Models
Medical Image Analysis, 2026
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Characterizing Continuous and Discrete Hybrid Latent Spaces for Structural Connectomes
SPIE Medical Imaging 2026: Image Processing, 2026OralAccepted
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Charting Confidence in White Matter Brain Charts: Enabling Study Planning Through Stability Validation
Journal of Medical Imaging, 2026
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Harmonizing MR Images Across 100+ Scanners: Multi-site Validation with Traveling Subjects and Real-world Protocols
MIDL, 2026Accepted
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Harmonizing the National Lung Screening Trial: Kernel Resolution and Field of View Compensation
PLOS ONE, 2026Accepted
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Impact of Reconstruction Kernel Variability on Segmentation Consistency in Low-dose Thoracic CT
SPIE Medical Imaging 2026: Image Processing, 2026Long oralAccepted
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Longitudinal Analysis of CYFRA 21-1 Levels in Patients with Pulmonary Nodules: Differential Trajectories between Benign and Malignant Cases
PLOS ONE, 2026
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Magnetic Resonance Unpaired Image Translation with Pseudometric Schrödinger Bridges
NeurIPS, 2026Accepted
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MetaVoxel: Joint Modeling of Imaging and Clinical Metadata with Diffusion Model
MIDL, 2026Accepted
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Multi-modality conditioned variational U-net for field-of-view extension in brain diffusion MRI
Magnetic Resonance Imaging, 2026
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Phenotype Discovery of Traumatic Brain Injury Segmentations from Heterogeneous Multi-site Data
SPIE Medical Imaging 2026: Image Processing, 2026Accepted
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Sample Structure, Refine Contrast: Zero-Shot MR Image Harmonization with a Phase-Preserving Diffusion Prior
SASHIMI, 2026Accepted
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Structural Harmonization of Multi-Site MR Neuroimaging Data in a Pediatric Population with Prenatal Alcohol Exposure
ISBI, 2026Accepted
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Synthetic Multi-inversion Time Magnetic Resonance Images for Visualization of Subcortical Structures
Journal of Medical Imaging, 2026
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UNISELF: A Unified Network with Instance Normalization and Self-Ensembled Lesion Fusion for Multiple Sclerosis Lesion Segmentation
Medical Image Analysis, 2026
2025
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A Technical Assessment of Latent Diffusion for Alzheimer’s Disease Progression
SPIE Medical Imaging 2025: Image Processing, 2025
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An Evaluation of Image-Based and Statistical Techniques for Harmonizing Brain Volume Measurements
Imaging Neuroscience, 2025
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An Unsupervised Approach for Artifact Severity Scoring in Multi-Contrast MR Images
MIDL, 2025
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Anatomy-Guided Multi-Path CycleGAN for Lung CT Kernel Harmonization
MIDL, 2025Oral
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Beyond the Lungs: Extending the Field-of-View in Chest CT with Latent Diffusion Models
SPIE Medical Imaging 2025: Image Processing, 2025Oral
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Bi-directional MS Lesion Filling And Synthesis Using Denoising Diffusion Implicit Model-based Lesion Repainting
SPIE Medical Imaging 2025: Image Processing, 2025Long oral
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Brain Age Identification from Diffusion MRI Synergistically Predicts Neurodegenerative Disease
Imaging Neuroscience, 2025
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Calibrating CT Slice Location And Body Part in Body Part Regression
SPIE Medical Imaging 2025: Image Processing, 2025
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Contrastive Patient-level Pretraining Enables Longitudinal and Multimodal Fusion for Lung Cancer Risk Prediction
MIDL, 2025
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Counterfactual Brain Amyloid Pathology Image Synthesis
SPIE Medical Imaging 2025: Image Processing, 2025Oral
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Enhancing Clinical Data Management through Barcode Integration and REDCap: Innovations in Scalability and Adaptability
JMIR Formative Research, 2025
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Harmonizing 10,000 Connectomes: Site-Invariant Representation Learning for Multi-site Analysis of Network Connectivity and Cognitive Impairment
Journal of Medical Imaging, 2025
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Influence of Early through Late Fusion on Pancreas Segmentation from Imperfectly Registered Multimodal Magnetic Resonance Imaging
Journal of Medical Imaging, 2025
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Investigating Effects of Air Quality And Weather on Brain Volumes
SPIE Medical Imaging 2025: Image Processing, 2025Oral
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Investigating the Impact of Kernel Harmonization And Deformable Registration on Inspiratory And Expiratory Chest CT Images for People with COPD
SPIE Medical Imaging 2025: Clinical and Biomedical Imaging, 2025
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Mesh-Prompted Anatomy Segmentation
MIDL, 2025Oral
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MSRepaint: Multiple Sclerosis Repaint with Conditional Denoising Diffusion Implicit Model for Bidirectional Lesion Filling and Synthesis
Medical Image Analysis, 2025
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Multipath cycleGAN for Harmonization of Paired and Unpaired Low-dose Lung Computed Tomography Reconstruction Kernels
Medical Physics, 2025
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Pitfalls of Defacing Whole-head MRI: Re-Identification Risk with Diffusion Models and Compromised Research Potential
Computers in Biology and Medicine, 2025
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Quantitative Analysis of Colonic Epithelial Cell Aging in a Cell-cycle-like Model: Changes in Nucleus and Cytoplasm along the Crypt Axis
SPIE Medical Imaging 2025: Digital and Computational Pathology, 2025
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Robust Body Composition Analysis by Generating 3D CT Volumes from Limited 2D Slices
SPIE Medical Imaging 2025: Image Processing, 2025Oral
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The TRaditional versus Early Aggressive Therapy for MS (TREAT-MS) trial: Design and baseline characteristics of participants
Contemporary Clinical Trials, 2025
2024
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An Overview of Disentangled Representation Learning for MR Image Harmonization
In Deep Learning for Medical Image Analysis, 2024
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Beyond MR Image Harmonization: Resolution Matters Too
SASHIMI, 2024Oral
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Deep-Learning based Segmentation of Hydrocephalus Brain Ventricle from Ultrasound
SPIE Medical Imaging 2024: Image Processing, 2024
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Harmonization-Enriched Domain Adaptation with Light Fine-tuning for Multiple Sclerosis Lesion Segmentation
SPIE Medical Imaging 2024: Clinical and Biomedical Imaging, 2024
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OCTA Segmentation with Limited Training Data using Disentangled Representation Learning
In Deep Learning for Medical Image Analysis, 2024
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Revisiting Registration-based Image Synthesis: A Focus on Unsupervised MR Image Synthesis
SPIE Medical Imaging 2024: Image Processing, 2024Long oral
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Towards An Accurate And Generalizable Multiple Sclerosis Lesion Segmentation Model Using Self-ensembled Lesion Fusion
ISBI, 2024
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Vector Field Attention for Deformable Image Registration
Journal of Medical Imaging, 2024
2023
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A Latent Space for Unsupervised MR Image Quality Control via Artifact Assessment
SPIE Medical Imaging 2023: Image Processing, 2023Oral
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Automated Ventricle Parcellation and Evan’s Ratio Computation in Pre-and Post-Surgical Ventriculomegaly
ISBI, 2023
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Exploring the Optimal Operating MR Contrast for Brain Ventricle Parcellation
MIDL, short paper, 2023
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HACA3: A Unified Approach for Multi-site MR Image Harmonization
Computerized Medical Imaging and Graphics, 2023
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Investigating the Effect of Cerebral Atrophy on Brain Deformation Using Subject-Specific Models
SPIE Medical Imaging 2023: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2023Oral
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Joint Synthesis of WMn MPRAGE and Parameter Maps using Deep Learning and an Imaging Equation
SPIE Medical Imaging 2023: Image Processing, 2023Oral
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Optimal Operating MR Contrast for Brain Ventricle Parcellation
ISBI, 2023
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Rapid Brain Meninges Surface Reconstruction with Layer Topology Guarantee
ISBI, 2023
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Recurrent Self Fusion: Iterative Denoising for Consistent Retinal OCT Segmentation
OMIA, 2023
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Self-supervised Super-resolution for Anisotropic MR Images with and Without Slice Gap
SASHIMI, 2023Best Paper AwardOral
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Unsupervised Quality Assurance for Brain MR Image Rigid Registration Using Latent Shape Representation
SPIE Medical Imaging 2023: Image Processing, 2023
2022
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Bi-directional Synthesis of Pre-and Post-contrast MRI via Guided Feature Disentanglement
SASHIMI, 2022
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Coordinate Translator for Learning Deformable Medical Image Registration
MMMI, 2022Oral
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Cranial Meninges Reconstruction based on convolutional networks and deformable models: applications to longitudinal study of normal aging
SPIE Medical Imaging 2022: Image Processing, 2022
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Disentangled Representation Learning for OCTA Vessel Segmentation with Limited Training Data
IEEE Transactions on Medical Imaging, 2022
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Disentangling a Single MR Modality
DALI, 2022Best Paper Award
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Evaluating the Impact of MR Image Contrast on Whole Brain Segmentation
SPIE Medical Imaging 2022: Image Processing, 2022Oral
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Evaluating the Impact of MR Image Harmonization on Thalamus Deep Network Segmentation
SPIE Medical Imaging 2022: Image Processing, 2022
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Medical Image Harmonization through Synthesis
In Biomedical Image Synthesis and Simulation, 2022
2021
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Autoencoder Based Self-supervised Test-time Adaptation for Medical Image Analysis
Medical Image Analysis, 2021
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Information-based Disentangled Representation Learning for Unsupervised MR Harmonization
IPMI, 2021Best Poster Award
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Unsupervised MR Harmonization by Learning Disentangled Representations Using Information Bottleneck Theory
NeuroImage, 2021
2020
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A Disentangled Latent Space for Cross-site MRI Harmonization
MICCAI, 2020Oral
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Self Domain Adapted Network
MICCAI, 2020Oral
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Synthesizing Realistic Brain MR Images with Noise Control
SASHIMI, 2020Oral
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Variational Intensity Cross Channel Encoder for Unsupervised Vessel Segmentation on OCT Angiography
SPIE Medical Imaging 2020: Image Processing, 2020Best Paper AwardOral
2019
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Automatic Quality Control using Hierarchical Shape Analysis for Cerebellum Parcellation
SPIE Medical Imaging 2019: Image Processing, 2019Oral
2018
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Automatic Outlier Detection Using Hidden Markov Model for Cerebellar Lobule Segmentation
SPIE Medical Imaging 2018: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2018Oral
Under review and preprints
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Characterizing Lung Nodule Phenotypes in Incidental and Screening Lung Cancer Populations
2027Under review
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Continuous Modeling of Infant White Matter Development Reveals Limitations of Age-binned Template Construction
2027Under review
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Generalizable Field of View Extension for Diffusion MRI via Conditional Flow Matching
2027Under review
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Neural Fields for Adaptive White Matter Microstructural Modeling
2027Under review
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Reconstruction Kernel Harmonization Impacts Cross-sectional Lung Nodule Characterization in the National Lung Screening Trial
2027Under review
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SliceBridge: Context-Consistent Repair of Corrupted Slice Intervals in T1-weighted MRI
2027Under review
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An Overview of Radiological Imaging
2026Under review
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Exploring the Added Value of White Matter BOLD in Preclinical Alzheimer’s Disease Classification
2026Under review
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Identity-Duplication Auditing in National-Scale Neuroimaging Repositories
2026Under review
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Noise2Reg for Optical Coherence Tomography Speckle Reduction
2026Under review
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Prospective Validation of Artificial Intelligence Lung Cancer Risk Prediction in a Screening Cohort
2026Under review
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Shape-Guided Anatomy Segmentation with Mesh Prompts
2026Under review
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Surrogate Supervision for Robust and Generalizable Deformable Image Registration
2026Under review
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Longitudinal Masked Representation Learning for Pulmonary Nodule Diagnosis from Language Embedded EHRs
medRxiv, 2025Preprint